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Biotechnology and Biomedical Engineering
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Bioinformatics and Data Science in Biotechnology
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Pairwise sequence alignment of Protein or DNA sequences
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Pairwise sequence alignment of Protein or DNA sequences
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Theory
Procedure
PreTest
Simulator
PostTest
Assignment
Reference
Feedback
1)
Example for global sequence alignment algorithm?
Kadane’s algorithm
Gale-shapley algorithm
Smith Waterman
Needleman Wunsch algorithm
2)
Example for local sequence alignment algorithm?
Kadane’s algorithm
Needleman Wunsch algorithm
Smith Waterman
Gale-shapley algorithm
3)
Alignment method suitable for aligning closely related sequence is
Multiple sequence alignment
Local alignment
Pairwise sequence alignment
Global alignment
4)
Sequence alignment helps scientists to
Trace out evolutionary relationships
Infer the functions to newly synthesized genes
Predict new members of gene families
All the above
5)
In pairwise sequence alignment, gap score represents
Insertion
Match
Mismatch
Insertion/Deletion
Cite this Simulator:
vlab.amrita.edu,. (2020). Pairwise sequence alignment of Protein or DNA sequences. Retrieved 3 June 2024, from vlab.amrita.edu/index.php/userfiles/theme/amrita/images/tab_icon_image/content_6.png?brch=311&cnt=3778&sim=1838&sub=3
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