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Biotechnology and Biomedical Engineering
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Bioinformatics Virtual Lab III
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Homology Modeling using Modeller
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Homology Modeling using Modeller
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Theory
Procedure
Self Evaluation
Simulator
Assignment
Reference
Feedback
1)
Protein structure is determined by _____________
Bonded atoms
Carbohydrates
Amino acid sequences
None of the above
2)
Largest structural database with experimentally resolved structures.
KEGG
PDB
SGD
Pymol
3)
The critical step in homology modelling
Loop modelling
Backbone generation
Model validation
Alignment correction
4)
Modeller is described as
Modeling by managing the bonded atoms
Modeling with hydrogen atoms
Modeling by satisfaction of restraints
Modeling with minimization
5)
The best loop conformation is determined with minimization using ____________
Initial alignment
BLAST
Monte Carlo
All the above
Cite this Simulator:
vlab.amrita.edu,. (2012). Homology Modeling using Modeller. Retrieved 25 April 2024, from vlab.amrita.edu/?sub=3&brch=275&sim=1481&cnt=3
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