|Writing and Reading Sequence Data in R|
This lab focuses on how to read and write data sequence using R programming.
|Reading FASTA using SequinR|
This lab focuses on teaching how to read and write FASTA formatted biological sequences in R
|Pairwise sequence alignment of Protein or DNA sequences|
To identify homologous biological sequences using pairwise sequence alignment in R
|Querying NCBI database in R|
This lab focuses on retrieving sequence data from NCBI using R
|UniProt Protein Sequence Retrieval in R|
This lab aims to provide basics of protein sequence databases and to understand how to retrieve sequence data from UniProt database using R programming
|Guanine-Cytosine Content Analysis and Basics of DNA Sequence Statistics|
This lab focuses to statistically find out guanine-cytosine (GC) content in a DNA sequence using R programming
|Calculating Genetic Distances from Protein Sequences|
This lab focuses to study functional and structural similarities, conserved sequence homologies and evolutionary relationships among different protein sequences
|Computing Scoring Matrices for Amino acids and Long pairwise Alignment in R|
The lab focuses to learn functional, structural and evolutionary relationships between different aminoacids sequences with scoring matrices.
|Retrieving a list of sequences from UniProt|
The lab focuses in retrieving protein sequence data and studying functional and evolutionary relationships between the sequences.
|DNA Sequence Analysis and Determining DNA Open Reading Frames|
This lab focuses to determine Open Reading Frame (ORF) of a nucleotide sequence using R programming to find gene location in a DNA sequence.
|Gene finding: Finding Start and Stop codons using R|
The lab focuses to learn the basics of genetic codes in translation and to find start codon and stop codon from a nucleotide sequence using R programming.
|Differential Expression Analyses of RNA-seq|
This lab focuses on understanding basics of RNA sequencing.
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