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Visualizing the Secondary Structure of a Protein
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Assignment

 

  1. Download the protein Human keratin from the protein databank site. View the structure of a protein, with a perfect representation where you can clearly differentiate the secondary structure of protein  and report the number of helices and the beta strands, also report whether structure contains loops or not.
  2. Differentiate two proteins Thrombin (PDB ID 1PPB) and trypsin(PDB ID 2PTN) in case of a secondary structure with number of helices and beta sheets?

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