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Biotechnology and Biomedical Engineering
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Bioinformatics Virtual Lab II
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Phylogenetic Analysis using PHYLIP - Rooted trees
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Phylogenetic Analysis using PHYLIP - Rooted trees
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Theory
Procedure
Self Evaluation
Simulator
Assignment
Reference
Feedback
1)
PHYLIP program accepts input only in which format
Phylip
Fasta
GenBank
EMBL
2)
Protdist uses which method
Distance matrix method
Maximum likelihood method
Neighbor nearst method
Parsimony method.
3)
Promlk estimates
Phylogeny from amino acid sequences maximum likelihood method
Phylogeny from amino acid sequences maximum likelihood method
Phylogeny from amino acid sequences distance matrix method
Phylogeny from nucleic sequences distance matrix method.
4)
Neighbor joining method belongs to which method.
Parsimony method
Distance method
Likelihood
Global and local
5)
ClustalW is a
Pairwise sequence alignment tool
Local sequence alignment tool
Global sequence alignment tool
Multiple sequence alignment tool
Cite this Simulator:
vlab.amrita.edu,. (2012). Phylogenetic Analysis using PHYLIP - Rooted trees. Retrieved 9 December 2024, from vlab.amrita.edu/?sub=3&brch=274&sim=1444&cnt=3
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