Assignment

1. Get the protein sequence of cystic fibrosis transmembrane conductance regulator (CFTR) from NCBI and go to Prosite (EBI).

• List down the matching patterns.
• Find out the positions of matching patterns.
• Describe in which family our entered sequence belongs to.

2.  Get the protein sequence of human keratin protein from NCBI and go to Prosite (EBI).

• Find out the accession number of the entered query
• Find out the pattern associated with the entered query.
• Change the parameter, ‘INCLUDE ABUNDANT PATTERNS’ and analyze the results.

3.  Get the protein sequence of human albumin protein from NCBI and go to Prosite (EBI).

• List down the matching patterns.
• Find out the positions of matching patterns
• Describe in which family our entered sequence belongs to.
• Change the parameters like ‘INCLUDE ABUNDANT PATTERNS’, VIEW RESULTS IN ASCII GRAPHICS’ etc. and analyze the results.