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Calculating the Distance between the Ligand and a Particular Amino acid
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  1.  Take a protein PANCREATIC TRYPSIN INHIBITOR PRECURSOR  find out the Ligand molecule  in it and find the distances between the ligand and particular amino acid.

 

 

  1. Take a protein called trypsin(2PTC), find out how many Ligand molecules are there in protein and calculate the distance between the ligand and 127th, 183rd, 147th, 157th and 164th amino acids.

 

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