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Biotechnology and Biomedical Engineering
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Bioinformatics and Data Science in Biotechnology
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Pairwise sequence alignment of Protein or DNA sequences
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Pairwise sequence alignment of Protein or DNA sequences
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Theory
Procedure
PreTest
Simulator
PostTest
Assignment
Reference
Feedback
1)
Example for global sequence alignment algorithm?
Kadane’s algorithm
Gale-shapley algorithm
Needleman Wunsch algorithm
Smith Waterman
2)
Example for local sequence alignment algorithm?
Kadane’s algorithm
Needleman Wunsch algorithm
Smith Waterman
Gale-shapley algorithm
3)
Alignment method suitable for aligning closely related sequence is
Global alignment
Local alignment
Multiple sequence alignment
Pairwise sequence alignment
4)
Sequence alignment helps scientists to
Trace out evolutionary relationships
Infer the functions to newly synthesized genes
Predict new members of gene families
All the above
5)
In pairwise sequence alignment, gap score represents
Mismatch
Match
Insertion
Insertion/Deletion
Cite this Simulator:
vlab.amrita.edu,. (2020). Pairwise sequence alignment of Protein or DNA sequences. Retrieved 6 December 2023, from vlab.amrita.edu/?sub=3&brch=311&sim=1838&cnt=3778
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